[BUGFIX] Call base setup in CLI bootstrap

The baseSetup call for the bootstrap was forgotten during the Application/ Bootstrap
refactoring. Add this call to the console application to fix the fatals.

Resolves: #67878
Related: #67808
Releases: master
Change-Id: Ic6a05b3d605a9f7cbde0b23e9d4417ef2d9c35fe
Reviewed-on: http://review.typo3.org/40837


Reviewed-by: Benjamin Mack <benni@typo3.org>
Tested-by: Benjamin Mack <benni@typo3.org>
Reviewed-by: Markus Klein <markus.klein@typo3.org>
Tested-by: Markus Klein <markus.klein@typo3.org>